BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C01LP1|AL425995
(821 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1666 1591 0.0
>3x_Contig1666
Length = 16162
Score = 1591 bits (796), Expect = 0.0
Identities = 809/821 (98%)
Strand = Plus / Plus
Query: 1 tgagttttcctgttgttgtggttgctgtgcttgggttgattgtagtctagtacaaatccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7505 tgagttttcctgttgttgtggttgctgtgcttgggttgattgtagtctagtacaaatccg 7564
Query: 61 ahatgatcttgggctcatagccgcaaaacttcttgtaactcttgtaagcattattaacta 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7565 aaatgatcttgggctcatagccgcaaaacttcttgtaactcttgtaagcattattaacta 7624
Query: 121 gccgttgtattattagtaggctgttgtgtggttatgcaggttttcccggtgtacaccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7625 gccgttgtattattagtaggctgttgtgtggttatgcaggttttcccggtgtacaccttt 7684
Query: 181 cttactatatagataacttatcgatttcctatggtaaatgccggctgaatcgttcttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7685 cttactatatagataacttatcgatttcctatggtaaatgccggctgaatcgttcttcat 7744
Query: 241 cttttcaactatgcttgaagctttaatttttcaaaattttcagcttgtaagaagaaggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7745 cttttcaactatgcttgaagctttaatttttcaaaattttcagcttgtaagaagaaggga 7804
Query: 301 cacctgtgcacctcataatamatgtvaaagaagctataacatacataaggcagtctataa 360
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 7805 cacctgtgcacctcataataaatgtaaaagaagctataacatacataaggcagtctataa 7864
Query: 361 tttvvtcatgctaattattcagatgcagtggatccactcaatgagtccatatcctgacca 420
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7865 tttaatcatgctaattattcagatgcagtggatccactcaatgagtccatatcctgacca 7924
Query: 421 ttttatctttcccaccgctacatacacgtttaccgtctacagaccaatctacagtgtaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7925 ttttatctttcccaccgctacatacacgtttaccgtctacagaccaatctacagtgtaga 7984
Query: 481 cttcatcttgatgaccgggtagatcgacggacagttttctagttttgacatcccagactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7985 cttcatcttgatgaccgggtagatcgacggacagttttctagttttgacatcccagactt 8044
Query: 541 ttaavgtggtatctttggracaagaaacgagtagtctacagtcgcttgaccaagctactt 600
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 8045 ttaaagtggtatctttggaacaagaaacgagtagtctacagtcgcttgaccaagctactt 8104
Query: 601 ggtagacactcgctacatgtcctctaaaggtggataggvatttdccatcccttccatccc 660
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 8105 ggtagacactcgctacatgtcctctaaaggtggataggaatttaccatcccttccatccc 8164
Query: 661 ataatttrvtggagttgtcaaaggatgcagnaacaatgtaacggccatctggcgaaaatg 720
||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 8165 ataatttaatggagttgtcaaaggatgcagaaacaatgtaacggccatctggcgaaaatg 8224
Query: 721 caacgtggttgacgagcttttggtggccggtcattctggtaataggtttagtagacttca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8225 caacgtggttgacgagcttttggtggccggtcattctggtaataggtttagtagacttca 8284
Query: 781 aggggttccacagatacatagtaaaatcgtcactggcagtt 821
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 8285 aggggttccacagatacatagtaaaatcgtcactggcagtt 8325
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.31
Gapped
Lambda K H
1.39 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4282
Number of Sequences: 1807
Number of extensions: 4282
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 821
length of database: 10,358,551
effective HSP length: 16
effective length of query: 805
effective length of database: 10,329,639
effective search space: 8315359395
effective search space used: 8315359395
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)